Automatic directory finder when making the installation

Codes/Makefile

@@ -10,6 +10,7 @@ DEF =
 
 # Final binary
 BIN = a.out
+CONFIG = config.txt
 # Put all auto generated stuff to this build dir.
 BUILD_DIR = ./build
 
@@ -27,6 +28,14 @@ DEP = $(OBJ:%.o=%.d)
 # Default target named after the binary.
 $(BIN) : $(BUILD_DIR)/$(BIN)
 
+# Default configuration file
+$(CONFIG) : $(BUILD_DIR)/$(CONFIG)
+$(BUILD_DIR)/$(CONFIG) :
+	mkdir -p $(@D)
+	@ echo -n "dir=\"" > $(BUILD_DIR)/$(CONFIG)
+	@ realpath -z $$(echo "$$(pwd)/..") >> $(BUILD_DIR)/$(CONFIG)
+	@ echo "\"" >> $(BUILD_DIR)/$(CONFIG)
+
 # Actual target of the binary - depends on all .o files.
 $(BUILD_DIR)/$(BIN) : $(OBJ)
 	$(MCC) $(C_FLAGS) $^ -o $@ $(LD_FLAGS)
@@ -45,12 +54,12 @@ $(BUILD_DIR)/%.o : %.c
 	$(MCC) $(C_FLAGS) $(DEF) -MMD -c $< -o $@
 
 clean:
-	-rm $(BUILD_DIR)/$(BIN) $(OBJ) $(DEP)
+	-rm $(BUILD_DIR)/$(BIN) $(BUILD_DIR)/$(CONFIG) $(OBJ) $(DEP)
 clear:
 	-rm -rf $(BUILDDIR)
 
 
-install: $(BIN)
+install: $(BIN) $(CONFIG)
 	echo "Done"
 
 # Builds target with slurm

Codes/runBase.sh

@@ -4,9 +4,10 @@
 #SBATCH -N 1
 #SBATCH --exclude=c01,c00,c02
 
-dir="/home/martini/malleability_benchmark"
 partition='P1'
 
+scriptDir="$(dirname "$0")"
+source $scriptDir/build/config.txt
 codeDir="/Codes"
 execDir="/Exec"
 cores=$(bash $dir$execDir/BashScripts/getCores.sh $partition)

Codes/runTrace.sh

@@ -4,7 +4,8 @@
 #SBATCH -N 1
 #SBATCH --exclude=c01,c00,c02
 
-dir="/home/martini/malleability_benchmark"
+scriptDir="$(dirname "$0")"
+source $scriptDir/build/config.txt
 codeDir="/Codes/build"
 resultsDir="/Results"
 execDir="/Exec"

Codes/runValgrind.sh

@@ -4,7 +4,8 @@
 #SBATCH -N 1
 #SBATCH --exclude=c01,c00,c02
 
-dir="/home/martini/malleability_benchmark"
+scriptDir="$(dirname "$0")"
+source $scriptDir/build/config.txt
 codeDir="/Codes"
 execDir="/Exec"
 

Exec/BashScripts/createInitialNodelist.sh

 #!/bin/bash
 
-dir="/home/martini/malleability_benchmark" #FIXME Obtain from another way
-
 # Runs in a given current directory all .ini files
 # Parameter 1(Optional) - Amount of executions per file. Must be a positive number
 #====== Do not modify these values =======

Exec/BashScripts/getNumPNeeded.sh

 #!/bin/bash
 
-dir="/home/martini/malleability_benchmark" #FIXME Obtain from another way
-
 # Runs in a given current directory all .ini files
 # Parameter 1(Optional) - Amount of executions per file. Must be a positive number
 #====== Do not modify these values =======

Exec/CheckRun.sh

 #!/bin/bash
 
-dir="/home/martini/malleability_benchmark/"
 partition="P1"
 
 # Checks if all the runs in the current working directory performed under a 
@@ -18,6 +17,8 @@ partition="P1"
 #               Must be a positive integer.
 #====== Do not modify the following values =======
 
+scriptDir="$(dirname "$0")"
+source $scriptDir/../Codes/build/config.txt
 codeDir="Codes/"
 execDir="Exec/"
 ResultsDir="Results/"
@@ -68,7 +69,7 @@ fi
 # then the scripts exits.
 #The user must figure out what to do with those runs.
 qtyG=$(ls R*_Global.out | wc -l)
-qtyG=$(($qtyG * 2))
+qtyG=$(($qtyG * $total_groups))
 qtyL=$(ls R*_G*N*.out | wc -l)
 if [ "$qtyG" == "$qtyL" ]
 then

Exec/Extrae/trace_worker.sh

 #!/bin/bash
-dir="/home/martini/malleability_benchmark"
+scriptDir="$(dirname "$0")"
+source $scriptDir/../../Codes/build/config.txt
 codeDir="/Codes/build"
 
 export EXTRAE_CONFIG_FILE=extrae.xml

Exec/multipleRuns.sh

 #!/bin/bash
 
-dir="/home/martini/malleability_benchmark/"
-
 # Creates a directory with all possible and valid combinations of configuration files
 #   that can be created from a given complex configuration file.
 # Parameter 1: Complex configuration file name.
 # Parameter 2: Common output name of the output configuration files. It will be appended an index to each of them.
 #====== Do not modify these values =======
 
+scriptDir="$(dirname "$0")"
+source $scriptDir/../Codes/build/config.txt
 codeDir="Codes/"
 execDir="Exec/"
 ResultsDir="Results/"

Exec/runAll.sh

 #!/bin/bash
 
-dir="/home/martini/malleability_benchmark"
 partition="P1"
 exclude="c00,c01,c02"
 
@@ -9,6 +8,8 @@ exclude="c00,c01,c02"
 # Parameter 2(Optional) - Maximum amount of time in seconds needed by a single execution. Default value is 0, which indicates infinite time. Must be a positive integer.
 #====== Do not modify these values =======
 
+scriptDir="$(dirname "$0")"
+source $scriptDir/../Codes/build/config.txt
 codeDir="/Codes/build"
 execDir="/Exec"
 ResultsDir="/Results"

Exec/singleRun.sh

 #!/bin/bash
 
-dir="/home/martini/malleability_benchmark"
 partition="P1"
 exclude="c00,c01,c02"
 
@@ -14,6 +13,8 @@ exclude="c00,c01,c02"
 # Parameter 6(Optional): Path where the output files should be saved. 
 #====== Do not modify these values =======
 
+scriptDir="$(dirname "$0")"
+source $scriptDir/../Codes/build/config.txt
 codeDir="/Codes/build"
 execDir="/Exec"
 ResultsDir="/Results"

Exec/singleRunCostum.sh

 #!/bin/bash
 
-dir="/home/martini/malleability_benchmark"
 cores=20
 
 # Executes a given configuration file. This script can be called with Slurm commands to 
@@ -12,6 +11,8 @@ cores=20
 # Parameter 5(Optional): Path where the output files should be saved. 
 #====== Do not modify these values =======
 
+scriptDir="$(dirname "$0")"
+source $scriptDir/../Codes/build/config.txt
 codeDir="/Codes/build"
 execDir="/Exec"
 ResultsDir="/Results"