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Modified structure of Codes directory, now code is divided into SAM and MaM. Exec files must be updated to consider changes in configuration

Code still must be tested. Added new communication stages IP2P+Wait. Added 3 different ways of capturing times + new configuration file variable (Capture_Method). Some refactors in results.c and configuration.c.

Anyadiendo funcionalidad de fases de iteracion. Se esta refactorizando los codigos de IOcodes y la configuracion